Bioconductor is a free, open source and open development software project for the analysis and comprehension of genomic data generated by wet lab experiments...
18 KB (1,274 words) - 21:49, 22 July 2024
in addition to CRAN snapshots, includes an archive of R packages from Bioconductor and Python packages from the Python Package Index. It also distributes...
22 KB (1,981 words) - 00:32, 20 July 2024
annotation of sequences of interest in the FigTree viewer. Additionally, the Bioconductor Biostrings package can be used to read and manipulate FASTA files in...
25 KB (2,148 words) - 16:15, 26 April 2024
Ihaka, as one of the originators of the R programming language and the Bioconductor project. Gentleman was awarded a Bachelor of Science degree in mathematics...
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Flow cytometry bioinformatics (section Bioconductor)
ISAC. Open software is most widely available in the form of a suite of Bioconductor packages, but is also available for web execution on the GenePattern...
76 KB (8,055 words) - 04:20, 26 June 2024
gene expression patterns and regulation. It is available through the Bioconductor repository. It was first presented in 2014. As of September 2023, its...
8 KB (605 words) - 14:54, 30 June 2024
untranslated region (UTR or NTR, nontranslated region). ORFik is a R-package in Bioconductor for finding open reading frames and using Next generation sequencing...
16 KB (1,898 words) - 09:12, 17 March 2024
8268. Robinson, Mark D & McCarthy, Davis J & Smyth, Gordon K edgeR: a Bioconductor package for differential expression analysis of digital gene expression...
67 KB (8,972 words) - 23:59, 6 August 2024
transcriptome on response to vaccination against herpes zoster. The Bioconductor project curates a variety of R packages aimed at integrating omic data:...
38 KB (4,093 words) - 23:30, 26 April 2024
line is straight on the zero line and shows as pink/black.) Several Bioconductor packages, for the R software, provide the facility for creating MA plots...
6 KB (760 words) - 23:59, 2 December 2023