• Thumbnail for Phred quality score
    A Phred quality score is a measure of the quality of the identification of the nucleobases generated by automated DNA sequencing. It was originally developed...
    13 KB (1,452 words) - 15:41, 13 August 2024
  • encode a Phred quality score from 0 to 93 using ASCII 33 to 126 (although in raw read data the Phred quality score rarely exceeds 60, higher scores are possible...
    31 KB (3,686 words) - 19:03, 23 July 2024
  • Phred may refer to: Phred (software), a computer program used in molecular biology Phred quality score, a term used in molecular biology Phred (Doonesbury)...
    390 bytes (84 words) - 16:00, 30 September 2021
  • in scores of value 0 (even with changes), undefined, or negative (even if better than positive). Benchmark Coding theory Information theory Phred quality...
    5 KB (415 words) - 17:56, 2 August 2024
  • developed, Phred produced significantly fewer errors in the data sets examined than other methods, averaging 40–50% fewer errors. Phred quality scores have...
    6 KB (879 words) - 17:33, 30 September 2021
  • shorter or one base longer. Read quality is typically measured by Phred which is an encoded score of each nucleotide quality within a read's sequence. Some...
    24 KB (2,864 words) - 15:34, 19 July 2024
  • Thumbnail for DNA barcoding
    (FASTA file) and a quality file with quality scores (PHRED scores) associated with each nucleotide of each DNA sequence. The PHRED scores indicate the probability...
    99 KB (11,142 words) - 01:40, 29 June 2024
  • Thumbnail for DNA sequencing
    and Brent Ewing of the University of Washington described their phred quality score for sequencer data analysis, a landmark analysis technique that gained...
    126 KB (14,372 words) - 20:35, 28 August 2024
  • recurring thread within the Phrap algorithms is the use of Phred quality scores. Phrap used quality scores to mitigate a problem that other assembly programs...
    6 KB (878 words) - 17:15, 13 August 2022
  • position (depth of coverage) Bases at that position from aligned reads Phred Quality of those bases, represented in ASCII with -33 offset (OPTIONAL) . (dot)...
    6 KB (575 words) - 02:25, 27 December 2023