• In computational chemistry, conformational ensembles, also known as structural ensembles, are experimentally constrained computational models describing...
    8 KB (837 words) - 05:08, 1 December 2023
  • Thumbnail for Protein structure
    amounts of experimental data to the conformations which is a very computationally demanding task. The conformational ensembles were generated for a number of...
    37 KB (4,204 words) - 19:21, 25 September 2024
  • Thumbnail for Protein complex
    modifications, protein interactions or alternative splicing modulate the conformational ensembles of fuzzy complexes, to fine-tune affinity or specificity of interactions...
    25 KB (2,841 words) - 17:04, 19 May 2024
  • Thumbnail for Intrinsically disordered proteins
    study conformational flexibility of IDPs and the kinetics of structural transitions, optical tweezers for high-resolution insights into the ensembles of...
    52 KB (6,004 words) - 15:08, 6 May 2024
  • Allosteric enzymes are enzymes that change their conformational ensemble upon binding of an effector (allosteric modulator) which results in an apparent...
    8 KB (1,027 words) - 11:08, 4 July 2022
  • assemblies, sequence alignments, docking results, trajectories, and conformational ensembles. High-quality images and movies can be created. Chimera includes...
    7 KB (742 words) - 06:32, 11 January 2024
  • Klaus R. (2019). "Characterizing the Diversity of the CDR-H3 Loop Conformational Ensembles in Relationship to Antibody Binding Properties". Frontiers in Immunology...
    16 KB (2,053 words) - 13:42, 22 September 2024
  • Thumbnail for Protein dynamics
    are not strictly static objects, but rather populate ensembles of (sometimes similar) conformations. Transitions between these states occur on a variety...
    23 KB (2,549 words) - 05:01, 22 April 2024
  • Lorber, DM; Shoichet, BK (1998). "Flexible ligand docking using conformational ensembles". Protein Sci. 7 (4): 938–950. doi:10.1002/pro.5560070411. PMC 2143983...
    5 KB (398 words) - 23:44, 2 April 2024
  • Thumbnail for Active site
    the induced fit model, and the conformational selection model. The latter two are not mutually exclusive: conformational selection can be followed by a...
    41 KB (4,859 words) - 19:37, 18 September 2024