L27 domain

L27 domain
Structure of presynaptic protein SAP97.[1]
Identifiers
SymbolL27
PfamPF02828
InterProIPR014775
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary
PDB1rso​, 1va8​, 1y74​, 1zl8
L27_1
hetero-tetrameric l27 (lin-2, lin-7) domain complexes as organization platforms of supra-molecular assemblies
Identifiers
SymbolL27_1
PfamPF09058
InterProIPR015143
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary
L27_2
2.1 angstrom crystal structure of the pals-1-l27n and patj l27 heterodimer complex
Identifiers
SymbolL27_2
PfamPF09045
InterProIPR015132
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary
L27_N
2.1 angstrom crystal structure of the pals-1-l27n and patj l27 heterodimer complex
Identifiers
SymbolL27_N
PfamPF09060
InterProIPR015145
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

The L27 domain is a protein domain that is found in receptor targeting proteins Lin-2 and Lin-7 (LIN7A, LIN7B, LIN7C), as well as some protein kinases and human MPP2 protein.[2] The L27 domain is a protein interaction module that exists in a large family of scaffold proteins, functioning as an organisation centre of large protein assemblies required for the establishment and maintenance of cell polarity. L27 domains form specific heterotetrameric complexes, in which each domain contains three alpha-helices.[1] The L27_2 domain is a protein-protein interaction domain capable of organising scaffold proteins into supramolecular assemblies by formation of heteromeric L27_2 domain complexes. L27_2 domain-mediated protein assemblies have been shown to play essential roles in cellular processes including asymmetric cell division, establishment and maintenance of cell polarity, and clustering of receptors and ion channels. Members of this family form specific heterotetrameric complexes, in which each domain contains three alpha-helices. The two N-terminal helices of each L27_2 domain pack together to form a tight, four-helix bundle in the heterodimer, whilst the third helix of each L27_2 domain forms another four-helix bundle that assembles the two units of the heterodimer into a tetramer.[3]

The L27_N domain is often found at the N-terminus of the L27 domain. It plays a role in the biogenesis of tight junctions and in the establishment of cell polarity in epithelial cells. Each L27_N domain consists of three alpha-helices, the first two of which form an antiparallel coiled-coil. Two L27 domains come together to form a four-helical bundle with the antiparallel coiled-coils formed by the first two helices. The third helix of each domain forms another coiled-coil packing at one end of the four-helix bundle, creating a large hydrophobic interface: the hydrophobic interactions are the major force that drives heterodimer formation.[4]

References

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  1. ^ a b Feng W, Long JF, Fan JS, Suetake T, Zhang M (May 2004). "The tetrameric L27 domain complex as an organization platform for supramolecular assemblies" (PDF). Nat. Struct. Mol. Biol. 11 (5): 475–80. doi:10.1038/nsmb751. PMID 15048107. S2CID 234860.
  2. ^ Doerks T, Bork P, Kamberov E, Makarova O, Muecke S, Margolis B (July 2000). "L27, a novel heterodimerization domain in receptor targeting proteins Lin-2 and Lin-7". Trends Biochem. Sci. 25 (7): 317–8. doi:10.1016/s0968-0004(00)01599-1. PMID 10871881.
  3. ^ Feng W, Long JF, Zhang M (May 2005). "A unified assembly mode revealed by the structures of tetrameric L27 domain complexes formed by mLin-2/mLin-7 and Patj/Pals1 scaffold proteins". Proc. Natl. Acad. Sci. U.S.A. 102 (19): 6861–6. Bibcode:2005PNAS..102.6861F. doi:10.1073/pnas.0409346102. PMC 1100767. PMID 15863617.
  4. ^ Li Y, Karnak D, Demeler B, Margolis B, Lavie A (July 2004). "Structural basis for L27 domain-mediated assembly of signaling and cell polarity complexes". EMBO J. 23 (14): 2723–33. doi:10.1038/sj.emboj.7600294. PMC 514954. PMID 15241471.

Further reading

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This article incorporates text from the public domain Pfam and InterPro: IPR014775
This article incorporates text from the public domain Pfam and InterPro: IPR015143
This article incorporates text from the public domain Pfam and InterPro: IPR015132
This article incorporates text from the public domain Pfam and InterPro: IPR015145